miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|296608077|gb|GW990672.1|GW990672 TTCTTCAAATAAAAATGGCTCTCTCTAAGCTTCTACTTGCTTCCCTTCTTGCTTCTCTTCTCATCATTCAACTTGTTCAT
GCCGATCACCAGGCATACCAACAAACGCAGGGTTCTCTTCAGCAGATAGACTGTAGCGGAGCATGTGCTGCAAGGTGTCG
GTTATCATCTCGTCCAAACCTCTGCCGCAGAGCCTGTGGAACTTGCTGCCAGCGTTGTAACTGCGTGCCGCCGGGCACCG
CCGGCAACCAGGAAGTGTGTCCTTGCTATGCTAGCTTGACCACTCACGGTGGCAGGCGCAAGTGCCCTTAATTCCAACCA
ATTACTTAAAGGTAAAAACTCAGGTGCAGTTGACTTCACGTGAAGTTGATAGCTAAGAATCGTTAGATGAAAATTTAGTC
CAATCAATCAAATTATCTAACGACTCTCAGTTATCAATTTCACATATTTCACGTAAAGTTGACTGTATCTAAATTTTCAC
CTTACTTAAATCCATGCATGTGTATATTACTCCATCACCACGCTCTCA




Most similar to sp|P46689|GASA1_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P46689|GASA1_ARATH Gibberellin-regulated protein 1
           OS=Arabidopsis thaliana GN=GASA1 PE=1 SV=2
          Length = 98

 Score =  131 bits (330), Expect = 2e-30
 Identities = 56/82 (68%), Positives = 63/82 (76%)
 Frame = +3

Query: 63  IIQLVHADHQAYQQTQGSLQQIDCSGACAARCRLSSRPNLCRRACGTCCQRCNCVPPGTA 242
           ++QLV AD +  Q+  G  ++IDC  AC ARCRLS RP LC RACGTCC RCNCVPPGT 
Sbjct: 17  VLQLVQADVENSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTY 76

Query: 243 GNQEVCPCYASLTTHGGRRKCP 308
           GN + C CYASLTTHGGRRKCP
Sbjct: 77  GNYDKCQCYASLTTHGGRRKCP 98